CDS

Accession Number TCMCG007C18313
gbkey CDS
Protein Id XP_009132384.1
Location complement(join(5867149..5867444,5867518..5867998,5868370..5868515,5868594..5868878,5868956..5868994,5869303..5869801,5869882..5869997,5870073..5870366,5870512..5870656))
Gene LOC103856988
GeneID 103856988
Organism Brassica rapa

Protein

Length 766aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009134136.3
Definition glycerophosphodiester phosphodiesterase GDPDL4-like [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category C
Description glycerophosphodiester phosphodiesterase
KEGG_TC -
KEGG_Module -
KEGG_Reaction R01030        [VIEW IN KEGG]
R01470        [VIEW IN KEGG]
KEGG_rclass RC00017        [VIEW IN KEGG]
RC00425        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01126        [VIEW IN KEGG]
EC 3.1.4.46        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00564        [VIEW IN KEGG]
map00564        [VIEW IN KEGG]
GOs GO:0000902        [VIEW IN EMBL-EBI]
GO:0000904        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0005975        [VIEW IN EMBL-EBI]
GO:0005976        [VIEW IN EMBL-EBI]
GO:0006073        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009664        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010016        [VIEW IN EMBL-EBI]
GO:0010026        [VIEW IN EMBL-EBI]
GO:0010052        [VIEW IN EMBL-EBI]
GO:0010103        [VIEW IN EMBL-EBI]
GO:0010374        [VIEW IN EMBL-EBI]
GO:0010383        [VIEW IN EMBL-EBI]
GO:0010441        [VIEW IN EMBL-EBI]
GO:0010442        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030243        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031225        [VIEW IN EMBL-EBI]
GO:0031226        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044036        [VIEW IN EMBL-EBI]
GO:0044042        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044262        [VIEW IN EMBL-EBI]
GO:0044264        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045229        [VIEW IN EMBL-EBI]
GO:0046658        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0051273        [VIEW IN EMBL-EBI]
GO:0052541        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0071554        [VIEW IN EMBL-EBI]
GO:0071555        [VIEW IN EMBL-EBI]
GO:0071669        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0090626        [VIEW IN EMBL-EBI]
GO:0090627        [VIEW IN EMBL-EBI]
GO:0090698        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATCACATCATACATGCAAGATAACCCATCAATGTTTGTGTCTCGAGCTTCCAAGTTCCTACTCTCTGTTCTCGTCTTGATCCAGCTTCTACCTACTCAACTCCTTGCTCAAAGATCCAAATCTCCATGGCAGACACTCACTGGAGAGGCTCCTCTTGTCATTGCACGTGGTGGGTTTTCTGGGTTGTTTCCAGATTCAAGCTTCAATGCTTACAGTTTCGTAGCGTCCACAAGTGCTCCCGACGCTGTCTTGTGGTGTGACGTGCAACTCACAAAGGATGGAGTTGGGATCTGTTTCCCTTATGTAACCATGTATAATGATTCTAACGTCCAAGAGGCTTACCCTAAAAAGAAAAACTCTTACCTTCTTAATGGAGTCCCTACTCAGGACTGGTTCACGGTTGATTTCACCTCCAGGGATCTGAACACCGTGTTCTTGACCCGAGGAGTATTATCACGGTCAAATGCATTTGATAACACCCAAAACGTGATTTCAACGGTTCAAGAAGTAGCTTCAGAGTTCAAACCTGCAGGGTTTTGGTTGAATGTTCAGCACGACGCTTTCTACACGCAGCACAACCTCAGCATGAGCAGCTTTCTTCTAACAGTATCCAAGACTGTGATCATTGACTACCTATCTTCCCCTGAGGTGTCTTTCTTCCGGAACATAGGTGGCCGGTTTGGTAAAACCGGACCAAAGTTTGTATTTAGGTTTCTAGACAAAGATGACGTTGAGGTGTCGACTAATCAAACCTATGGATCTCTCATGAAAAACCTAACATTCATCAAGACCTTTGCTTCTGGTGTTCTTGTTCCCAAGTCTTACATATGGCCGGTGAAAGACCAGTACTTGCTTCCACATACATCATTTGTTCGAGATGCTCACACAGCAGGGTTACAAGTGTATGGATCAGGTTTTGCAAATGATTTTGATATAGCGTACAACTACAGTTATGATCCGTTAACTGAGTACTTATCATTCATGGACAACGGGGACTTCTCTGTGGATGGTTTTCTATCTGATTTTCCCTTAACCGCATCGTCAGCTATTGACTGTTTCTCCCATCTTGGAAGTAATGCTTCAACACAAGTGGATTTTCTTGTTATATCGAAAAATGGAGCAAATGGTGACTACCCTGGCAGCACTGACTTGGCCTATACAAAGGCTATCAAAGACGGTGCTGATATCATCGATTGTGCGGTTCAAATGTCATCAGACGGGATCCCCTTTTGCTTAAACTCAACCAATCTTGGAGAGAGCATGAACATTGTCCAAACTCCTTTCAGAAACCGCTCAACAACTGTTCCTGAGTTTAACTCACTTGCTGGACTATACAGCTTTAATTTGGCATGGTCTGAGATTCAGACCTTGACACCTGCTATTTCAAACCCCTACAGCAGGAATTTTCACATGTTTAGGAATCCGAGGGAGAGAAGTTCAGGGAAGCTTGTTTCACTCTCCGAGTTCCTGAACTTGGCGAATAACTCCAGCTCACTAGTTGGTGTTTTGATCAACGTTGAGCATGCAGCATACCTGAGAGAGAAGCAAGGACTCGACGTTGTTAAAGCAGTTCTAGACACACTCAAAGAATCTGGTTACAGCAACGCGACCAAAAGGGTTATGATTCAGTCATCTAACAGCTCAGTCTTGGTCGACATCAAGAAACAGAGCCGGTACGAGACAGTGTACCAAGTGGAAGAAACAATCCGCGACATCCAAGACTCTGCGATCCAAGACATCAAGAAGTTCGCTGACGCTGTTGTCGTCGGAAGATTTTCGCTCTACCCGATCAGCGCTAGCTTCATCACCGGTCAGACTAATCTAGTGGAGAGGCTACAGAAGTTTAAGCTTCCGGTTTACGTTGAAACGTTCCGGAACGAGTTTGTCTCTCAGGCGTATGACTTCTTATCTGATGCGACTGTGGAGATAAACACGCATGTTACTGGAGCTGGTGTCAGTGGAACCATCACTGAGTTCCCTCTCACTGCCGCCAGATACAAAAGGAACAGGTGCGTGGCCCGCAAAGACACGCCTGTTTACATGATCCCGGTTCGGCCAGCTGGCCTGTTAGAAATCGTGAGTCCTACTTTTTTACCTCCAGCTGAAGCACCAAACCCGGTTATCACAGATGCTGATGTCACTGAACCACCACTTCCTCCGGTCACAGCCAAAGCTCCAACCACCAGCCCTGGACCCTTACCAACTGATAAAAAAGCTCCTAACGGACAAACACGAGTCACTCTATCTGTTTTTCTTTCTGCATTCGATGTGGTTCTTGCCTCTCTTCTACTTCTGTGA
Protein:  
MITSYMQDNPSMFVSRASKFLLSVLVLIQLLPTQLLAQRSKSPWQTLTGEAPLVIARGGFSGLFPDSSFNAYSFVASTSAPDAVLWCDVQLTKDGVGICFPYVTMYNDSNVQEAYPKKKNSYLLNGVPTQDWFTVDFTSRDLNTVFLTRGVLSRSNAFDNTQNVISTVQEVASEFKPAGFWLNVQHDAFYTQHNLSMSSFLLTVSKTVIIDYLSSPEVSFFRNIGGRFGKTGPKFVFRFLDKDDVEVSTNQTYGSLMKNLTFIKTFASGVLVPKSYIWPVKDQYLLPHTSFVRDAHTAGLQVYGSGFANDFDIAYNYSYDPLTEYLSFMDNGDFSVDGFLSDFPLTASSAIDCFSHLGSNASTQVDFLVISKNGANGDYPGSTDLAYTKAIKDGADIIDCAVQMSSDGIPFCLNSTNLGESMNIVQTPFRNRSTTVPEFNSLAGLYSFNLAWSEIQTLTPAISNPYSRNFHMFRNPRERSSGKLVSLSEFLNLANNSSSLVGVLINVEHAAYLREKQGLDVVKAVLDTLKESGYSNATKRVMIQSSNSSVLVDIKKQSRYETVYQVEETIRDIQDSAIQDIKKFADAVVVGRFSLYPISASFITGQTNLVERLQKFKLPVYVETFRNEFVSQAYDFLSDATVEINTHVTGAGVSGTITEFPLTAARYKRNRCVARKDTPVYMIPVRPAGLLEIVSPTFLPPAEAPNPVITDADVTEPPLPPVTAKAPTTSPGPLPTDKKAPNGQTRVTLSVFLSAFDVVLASLLLL